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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs78131725 chr10:81820919 C/G 0.000253 489 16.2 15.9 11.73 KM Plot
THCA rs78134449 chr6:24430401 A/T 5.46E-7 482 16.37 14.9 9.25 KM Plot
THCA rs78167983 chr1:91804353 C/G 8.05E-6 488 15.68 17.03 17.77 KM Plot
THCA rs7817176 chr8:52444094 C/T 0.000173 486 16.37 14.67 9.95 KM Plot
THCA rs7818450 chr8:52432392 G/C 1.41E-6 487 14.97 17.65 18.13 KM Plot
THCA rs78205549 chr3:56552258 T/A 6.07E-5 488 16.63 13.5 8.97 KM Plot
THCA rs78206495 chr6:24403549 C/A 5.55E-15 487 16.38 14.85 11.07 KM Plot
THCA rs78212084 chr14:59770439 G/A 1.38E-8 487 16.37 14.1 5.45 KM Plot
THCA rs78214351 chr10:104822688 A/G 5.02E-9 490 15.23 17.68 32.1 KM Plot
THCA rs7825498 chr8:52445788 G/A 0 489 16.38 14.55 7.3 KM Plot
THCA rs78266234 chr4:108723235 AG/A 0.000299 485 15.63 16.73 13.33 KM Plot
THCA rs78266849 chr7:43954755 T/C 0.000139 477 16.07 14.95 16.47 KM Plot
THCA rs78270394 chr14:59752088 A/G 1.4E-8 488 16.38 12.62 5.45 KM Plot
THCA rs78271461 chr14:59759114 C/A 1.4E-8 488 16.38 12.62 5.45 KM Plot
THCA rs78279590 chr6:24427549 G/T 6.22E-15 487 16.33 14.85 11.07 KM Plot